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Workflow MMVEC (version mmvec_reengineer:release_15)
Status

Archive: mmvec_output/conditional.qza inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/VERSION inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/metadata.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/checksums.md5 inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/VERSION inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/citations.bib inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/metadata.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/f0927026-d22c-4eb2-9d86-60b60e190f4b/VERSION inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/f0927026-d22c-4eb2-9d86-60b60e190f4b/citations.bib inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/f0927026-d22c-4eb2-9d86-60b60e190f4b/metadata.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/f0927026-d22c-4eb2-9d86-60b60e190f4b/action/action.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/f0927026-d22c-4eb2-9d86-60b60e190f4b/action/metadata.tsv inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/e54842f4-252a-4937-aa1a-979c28e3db2f/VERSION inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/e54842f4-252a-4937-aa1a-979c28e3db2f/citations.bib inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/e54842f4-252a-4937-aa1a-979c28e3db2f/metadata.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/e54842f4-252a-4937-aa1a-979c28e3db2f/action/action.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/ee9dd0af-63f2-4f3a-a5c1-a3a9e3a338aa/VERSION inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/ee9dd0af-63f2-4f3a-a5c1-a3a9e3a338aa/citations.bib inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/ee9dd0af-63f2-4f3a-a5c1-a3a9e3a338aa/metadata.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/ee9dd0af-63f2-4f3a-a5c1-a3a9e3a338aa/action/action.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/ee9dd0af-63f2-4f3a-a5c1-a3a9e3a338aa/action/metadata.tsv inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/076b7a81-9c1e-47b3-b659-0ac73b44c872/VERSION inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/076b7a81-9c1e-47b3-b659-0ac73b44c872/citations.bib inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/076b7a81-9c1e-47b3-b659-0ac73b44c872/metadata.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/076b7a81-9c1e-47b3-b659-0ac73b44c872/action/action.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/076b7a81-9c1e-47b3-b659-0ac73b44c872/action/metadata.tsv inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/1c69f17f-59de-4657-982c-dbb432e14e5a/VERSION inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/1c69f17f-59de-4657-982c-dbb432e14e5a/citations.bib inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/1c69f17f-59de-4657-982c-dbb432e14e5a/metadata.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/artifacts/1c69f17f-59de-4657-982c-dbb432e14e5a/action/action.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/provenance/action/action.yaml inflating: 3cea0c1c-072d-4c78-8f59-1ef838711d0c/data/conditionals.tsv unzip -o mmvec_output/conditional.qza Traceback (most recent call last): File "/data/beta-proteomics2/tools/mmvec/mmvec_reengineer:release_15/decode_mmvec.py", line 48, in <module> records_df = records_df.merge(molecules_metadata_df, how="left", left_on="molecule_identifier", right_on="feature id") File "/data/beta-proteomics2/tools/anaconda3/lib/python3.7/site-packages/pandas/core/frame.py", line 6389, in merge copy=copy, indicator=indicator, validate=validate) File "/data/beta-proteomics2/tools/anaconda3/lib/python3.7/site-packages/pandas/core/reshape/merge.py", line 61, in merge validate=validate) File "/data/beta-proteomics2/tools/anaconda3/lib/python3.7/site-packages/pandas/core/reshape/merge.py", line 551, in __init__ self.join_names) = self._get_merge_keys() File "/data/beta-proteomics2/tools/anaconda3/lib/python3.7/site-packages/pandas/core/reshape/merge.py", line 857, in _get_merge_keys rk, stacklevel=stacklevel)) File "/data/beta-proteomics2/tools/anaconda3/lib/python3.7/site-packages/pandas/core/generic.py", line 1382, in _get_label_or_level_values raise KeyError(key) KeyError: 'feature id' Tool execution terminates abnormally with exit code [1]
Userkcweldon (kellyweldon3@gmail.com), Dorrestein Lab
Title
Kelly MMVEC Seed Grant Sejal Fecal Test 2
Date Created 2019-11-14 14:07:27.0
Execution Time 1 hour 19 minutes 48 seconds
Progress
Metabolites biom qza
kcweldon/Dorrestein_Projects/MMVEC_Test/Sejal_Fecal_metabolomicsfiltered.qza
Metabolites Annotations
kcweldon/Dorrestein_Projects/MMVEC_Test/Sejal_Fecal_Annotations.tsv
Microbiome biom qza
kcweldon/Dorrestein_Projects/MMVEC_Test/Sejal_Fecal_Deblur150Trimmed_filtered.qza
Microbiome Taxonomy Annotations
kcweldon/Dorrestein_Projects/MMVEC_Test/taxonomy.tsv